Exploiting Normal Contamination to Infer Copy Number from Deep
Sequencing
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Documentation for package ‘DeepCNV’ version 0.12.2
Help Pages
| as.data.frame-method | Class "CNVPosterior" |
| cnPrior | Class "CNVPrior" |
| cnSet | Simulating Read-Counts and Working With Priors for DeepCNV |
| CNVariant | Simulating Read-Counts and Working With Priors for DeepCNV |
| cnvLikelihood | Simulating Read-Counts and Working With Priors for DeepCNV |
| CNVPosterior | Class "CNVPosterior" |
| CNVPosterior-class | Class "CNVPosterior" |
| CNVPrior | Class "CNVPrior" |
| CNVPrior-class | Class "CNVPrior" |
| hist-method | Class "CNVPosterior" |
| makeCNVPosterior | Class "CNVPosterior" |
| multiCNVPosterior | Class "MultiCNVPosterior" |
| MultiCNVPosterior-class | Class "MultiCNVPosterior" |
| plot-method | Class "CNVPrior" |
| plot-method | Class "CNVPosterior" |
| plot-method | Class "MultiCNVPosterior" |
| setCNVPrior | Class "CNVPrior" |
| simReads | Simulating Read-Counts and Working With Priors for DeepCNV |
| summary-method | Class "CNVPrior" |
| summary-method | Class "CNVPosterior" |
| summary-method | Class "MultiCNVPosterior" |
| vtSet | Simulating Read-Counts and Working With Priors for DeepCNV |