ssCellStemList-class {ssExtra} | R Documentation |
"ssCellStemList"
This class is used in the simulation of big BAF
sampling through the "ssBigBAF"
class slots. It
is a class that probably would not be used too much outside of the
above or similar. It contains several lists and data frames that aid
in working with tree-wise aggregates like tree VBARs on
individual cells/points.
Objects can be created by calls of the form new("ssCellStemList",
...)
. However, it is simpler and less error-prone to use the constructor of the
same name: ssCellStemList
.
description
:Object of class "character"
— A
description of the object.
cellsInStems
:Object of class "list"
— A
list of cell numbers w/in each individual stem's inclusion zone.
stemsInCells
:Object of class "list"
— A list
of stem IDs whose inclusion zones overlap each individual
cell—for all cells that contain inclusion zones. Note that
background cells are excluded.
sumSIC
:Object of class "data.frame"
— A
summary data frame based on stemsInCells
with the number of
cells containing n stem inclusion zone overlaps.
sumCIS
:Object of class "data.frame"
— A
summary data frame based on cellsInStems
with the number of
stem inclusion zones containing n cells. This will normally
be quite a bit longer than the sumSIC
data frame.
cellIDs
:Object of class "character"
— A
vector of the cell IDs in the stemsInCells
list.
cellNums
:Object of class "integer"
— Integer
version of cellIDs
.
stemIDs
:Object of class "character"
— A
vector of the stem IDs in the cellsInStems
list.
There are currently no methods defined with class "ssCellStemList" in the signature.
Jeffrey H. Gove
# # if nhAll310.bb is an "ssBigBAF" object, then # ## Not run: head(nhAll310.bb@csl.bb@cellsInStems) length(nhAll310.bb@csl.bb@cellsInStems) length(nhAll310.bb@csl.bb@stemsInCells) ## End(Not run)