Fitting kinetic models to microbial respiration data


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Documentation for package ‘twKinresp’ version 0.0.5

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twKinresp-package Fitting kinetic models to microbial respiration data.
assembleKinrespData assembleKinrespData
calcKinrespCoef calcKinrespCoef
calcKinrespQs calcKinrespQs
calcKinrespY calcKinrespY
coef.kinresp coef kinresp
coefKinresp coefKinresp default
coefKinresp.default coefKinresp default
coefKinresp.kinrespList coefKinresp kinrespList
coefKinrespBeta coefKinrespBeta default
coefKinrespBeta.default coefKinrespBeta default
coefKinrespBeta.kinrespList coefKinrespBeta kinrespList
coefKinrespMatrix coefKinrespMatrix
coefKinrespNormStart coefKinrespNormStart
coefList coefList kinrespList
coefList.kinrespList coefList kinrespList
combineKinrespLists combineKinrespLists
confint.kinresp confint kinresp
confint.nlme confint nlme
confintKinresp confintKinresp
extractCorrMatrix extractCorrMatrix gnls
extractCorrMatrix.gnls extractCorrMatrix gnls
extractCorrMatrix.nlme extractCorrMatrix nlme
fitKinrespBetaReplicate fitKinrespBetaReplicate
fitKinrespBetaSuite fitKinrespBetaSuite
fitKinrespExpAll fitKinrespExpAll
fitKinrespExperiment fitKinrespExperiment
fitKinrespReplicate fitKinrespReplicate
fitKinrespSuite fitKinrespSuite
fixef.gnls fixef gnls
fixef.kinresp fixef kinresp
getSERId getSERId
getUnlimitedGrowthData getUnlimitedGrowthData kinresp
getUnlimitedGrowthData.default getUnlimitedGrowthData default
getUnlimitedGrowthData.kinresp getUnlimitedGrowthData kinresp
getUnlimitedGrowthData.kinrespList getUnlimitedGrowthData kinrespList
kinrespGrowthphase kinrespGrowthphase
kinrespGrowthphaseExperiment kinrespGrowthphaseExperiment
kinrespGrowthphaseReplicate kinrespGrowthphaseReplicate
kinrespModel1 kinrespModel1
kinrespParDist kinrespParDist gnls
kinrespParDist.gnls kinrespParDist gnls
kinrespParDist.nlme kinrespParDist nlme
modelKinrespBeta modelKinrespBeta
modelKinrespMic modelKinrespMic
modelPar3 modelPar3
plotKinrespDiagnostics plotKinrespDiagnostics default
plotKinrespDiagnostics.default plotKinrespDiagnostics default
plotKinrespDiagnostics.kinresp plotKinrespDiagnostics kinresp
plotKinrespDiagnostics.kinrespList plotKinrespDiagnostics kinrespList
respWutzler10 Measured kinetics of Microbial Respiration.
setFactorKinrespData setFactorKinrespData
twKinresp Fitting kinetic models to microbial respiration data.