Model Evaluation and Analysis

Documentation for package ‘modEvA’ version 1.4

modEvA-package	Model Evaluation and Analysis
arrangePlots	Arrange plots
AUC	Area Under the ROC Curve
Dsquared	Proportion of deviance explained by a GLM
evaluate	Evaluate a GLM based on the elements of a confusion matrix.
evenness	Evenness in a binary vector.
getBins	Get bins of continuous values.
getModEqn	Get model equation
HLfit	Hosmer-Lemeshow goodness of fit
MESS	Multivariate Environmental Similarity Surfaces based on a data frame
MillerCalib	Miller's calibration satistics for logistic regression models
modEvA	Model Evaluation and Analysis
modEvAmethods	Methods implemented in modEvA functions
multModEv	Multiple model evaluation
OA	Overlap Analysis
optiPair	Optimize the classification threshold for a pair of related model evaluation measures.
optiThresh	Optimize threshold for model evaluation.
plotGLM	Plot a generalized linear model
prevalence	Prevalence
range01	Shrink or stretch a vector to make it range between 0 and 1
rotif.mods	Rotifer distribution models
RsqGLM	R-squared measures for GLMs
standard01	Standardize to 0-1 (or vice-versa)
threshMeasures	Threshold-based measures of model evaluation
varPart	Variation partitioning