plotOtu {ebimetagenomics} | R Documentation |
This function takes as input a data frame representing OTU counts, such as returned by getRunOtu
, plots it on the graphics device.
plotOtu(otu)
otu |
An OTU data frame. |
The function returns silently, and is called purely for its side-effect of rendering plots on the graphics device.
getSampleOtu
, getRunOtu
, convertOtuTad
ps=getProjectSummary("SRP047083") samp=projectSamples(ps) runs=runsBySample(ps,samp[2]) otu=getRunOtu(runs[1]) plotOtu(otu)