An R package for cosegregation analysis and simulating pedigrees


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Documentation for package ‘CoSeg’ version 0.2

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CoSeg-package An R package for cosegregation analysis and simulating pedigrees
add.affected.to.tree Add affection status to a given tree
BRCA1frequencies.df BRCA1 cancer incidence data frame
BRCA2frequencies.df BRCA2 cancer incidence data frame
CalculateLikelihoodRatio A function to calculate the likelihood ratio
ChinaDemographics.df Chinese Demographics Data Frame
CoSeg An R package for cosegregation analysis and simulating pedigrees
LSfrequencies.df Lynch Syndrome cancer incidence data frame
make.affected.trees Make affected trees
make.tree Make a tree
plotped Plots a tree/pedigree
USDemographics.df United States Demographics Data Frame