box |
Boxshade: Shading Multiple Aligned Sequences |
boxshade |
Boxshade: Shading Multiple Aligned Sequences |
boxshade_help |
Boxshade: Shading Multiple Aligned Sequences |
clustal |
Run Multiple Sequence Alignment (ClustalW) on a Set of Sequences |
clustal_help |
Run Multiple Sequence Alignment (ClustalW) on a Set of Sequences |
distAlignment |
Calculate Distances between Sets of Sequences |
distApe |
Calculate Distances between Sets of Sequences |
distCV |
Calculate Distances between Sets of Sequences |
distEdit |
Calculate Distances between Sets of Sequences |
distFFP |
Calculate Distances between Sets of Sequences |
distKMer |
Calculate Distances between Sets of Sequences |
distNSV |
Calculate Distances between Sets of Sequences |
distSimRank |
Calculate Distances between Sets of Sequences |
kalign |
Multiple Sequence Alignment (Kalign) |
kalign_help |
Multiple Sequence Alignment (Kalign) |
mafft |
Run Multiple Sequence Alignment (MAFFT) on a Set of Sequences |
mafft_help |
Run Multiple Sequence Alignment (MAFFT) on a Set of Sequences |
muscle |
Run Multiple Sequence Alignment (MUSCLE) on a Set of Sequences |
muscle_help |
Run Multiple Sequence Alignment (MUSCLE) on a Set of Sequences |
mutations |
Creates Random Mutations of a Sequence |
plot |
Plot Genetic Sequences and Alignments |
plot.DNAMultipleAlignment |
Plot Genetic Sequences and Alignments |
plot.DNAStringSet |
Plot Genetic Sequences and Alignments |
plot.RNAMultipleAlignment |
Plot Genetic Sequences and Alignments |
plot.RNAStringSet |
Plot Genetic Sequences and Alignments |
random_sequences |
Create a Set of Random Sequences |
rMSA_INSTALL |
Installing Third-Party Software for rMSA |
rMSA_install |
Installing Third-Party Software for rMSA |
simRank |
Compute the SimRank Similarity between Sets of Sequences |