Point Process Statistics


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Documentation for package ‘ppstat’ version 0.9.5

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A B C D E F G H I J L M O P R S T U V misc

ppstat-package Point Process Statistics
processdata-package Process Data

-- A --

archeaVirus Archea virus genome data.

-- B --

bSpline B-Splines bases

-- C --

coefficients-method Class "PointProcessModel"
coefficients<- Class "PointProcessModel"
coefficients<--method Class '"PointProcessKernel"'
coefficients<--method Class "PointProcessModel"
colNames Class "MarkedPointProcess"
colNames-method Class "ContinuousProcess"
colNames-method Class "MarkedPointProcess"
colNames-method Class "ProcessData"
colNames<- Class "MarkedPointProcess"
computeBasis Computes function evaluations
computeBasis-method Computes function evaluations
computeDDMinusLogLikelihood Class "PointProcessModel"
computeDDMinusLogLikelihood-method Class '"PointProcessKernel"'
computeDDMinusLogLikelihood-method Class "PointProcessModel"
computeDDMinusLogLikelihood-method Class '"PointProcessSmooth"'
computeDMinusLogLikelihood Class "PointProcessModel"
computeDMinusLogLikelihood-method Class '"PointProcessKernel"'
computeDMinusLogLikelihood-method Class "PointProcessModel"
computeDMinusLogLikelihood-method Class '"PointProcessSmooth"'
computeLinearPredictor Class "PointProcessModel"
computeLinearPredictor-method Class "PointProcessModel"
computeMinusLogLikelihood Class "PointProcess"
computeMinusLogLikelihood-method Class "PointProcess"
computeMinusLogLikelihood-method Class '"PointProcessKernel"'
computeMinusLogLikelihood-method Class "PointProcessModel"
computeMinusLogLikelihood-method Class '"PointProcessSmooth"'
computeModelMatrix Class "PointProcessModel"
computeModelMatrix-method Class "PointProcessModel"
const Indicator function multiplied by a constant.
contExam Four small example data sets.
continuousData Two small example data sets.
continuousProcess Continuous Process
ContinuousProcess-class Class "ContinuousProcess"
continuousProcess-method Continuous Process

-- D --

dim-method Class "ContinuousProcess"
dim-method Class "MarkedPointProcess"
dim-method Class "ProcessData"

-- E --

example Four small example data sets.
exampleDataFrames Two small example data sets.

-- F --

factExam Four small example data sets.
Family Class "Family"
Family-class Class "Family"
family-method Class "Family"
family-method Class "PointProcess"
formula-method Class '"MultivariatePointProcess"'
formula-method Class "PointProcess"
formula<--method Class "PointProcess"

-- G --

gaussianKernel Reproducing kernels
getColumns Extraction of column(s) from a process data object.
getColumns-method Extraction of column(s) from a process data object.
getEquiDistance Class "ContinuousProcess"
getEquiDistance-method Class "ContinuousProcess"
getFactors Class "ContinuousProcess"
getFactors-method Class "ContinuousProcess"
getId Class "ContinuousProcess"
getId-method Class "ContinuousProcess"
getId-method Class "ProcessData"
getInformation Stepwise point process model selection
getInformation-method Stepwise point process model selection
getLinearFilter Class "PointProcessModel"
getLinearFilter-method Class '"MultivariatePointProcess"'
getLinearFilter-method Class "PointProcessModel"
getMarkType Class "MarkedPointProcess"
getMarkType-method Class "MarkedPointProcess"
getMarkValue Class "MarkedPointProcess"
getMarkValue-method Class "MarkedPointProcess"
getModelMatrix Class "PointProcessModel"
getModelMatrix-method Class "PointProcessModel"
getNumerics Class "ContinuousProcess"
getNumerics-method Class "ContinuousProcess"
getPlotData Methods for 'plot' in Package 'processdata'
getPlotData-method Methods for 'plot' in Package 'processdata'
getPointId Class "MarkedPointProcess"
getPointId-method Class "MarkedPointProcess"
getPointPointer Class "MarkedPointProcess"
getPointPointer-method Class "MarkedPointProcess"
getPointPosition Class "MarkedPointProcess"
getPointPosition-method Class "MarkedPointProcess"
getPointTime Class "MarkedPointProcess"
getPointTime-method Class "MarkedPointProcess"
getPosition Class "ContinuousProcess"
getPosition-method Class "ContinuousProcess"
getRegisteredParBackend Parallel backend for the 'ppstat' package.
getTime Class "ContinuousProcess"
getTime-method Class "ContinuousProcess"
getUnitData Class "ContinuousProcess"
getUnitData-method Class "ContinuousProcess"
getUnitData-method Class "ProcessData"
getValue Class "ContinuousProcess"
getValue-method Class "ContinuousProcess"
Gibbs Creates a point process family object

-- H --

Hawkes Creates a point process family object
hawkesRate Intensity for the Hawkes process.

-- I --

integrator Integrator of a marked point process
integrator-method Integrator of a marked point process

-- J --

jumpExam Four small example data sets.
jumpProcess jumpProcess
JumpProcess-class Class "JumpProcess"
jumpProcess-method jumpProcess

-- L --

lapplyParallel Parallel backend for the 'ppstat' package.

-- M --

makeLink Class "Family"
markedPointProcess Marked Point Process
MarkedPointProcess-class Class "MarkedPointProcess"
markedPointProcess-method Marked Point Process
MultivariatePointProcess-class Class '"MultivariatePointProcess"'

-- O --

object.size-method The memory used to store a process data R object.
Ogata Multivariate Ogata thinning algorithm

-- P --

penalty Class "PointProcessModel"
penalty-method Class "PointProcessModel"
penalty<- Class "PointProcessModel"
penalty<--method Class "PointProcessModel"
plot-method Class "PointProcessModel"
plot-method Methods for 'plot' in Package 'processdata'
pointData Two small example data sets.
pointExam Four small example data sets.
PointProcess-class Class "PointProcess"
PointProcessKernel-class Class '"PointProcessKernel"'
pointProcessModel Construction and estimation of a generalized linear point process model.
PointProcessModel-class Class "PointProcessModel"
PointProcessSmooth-class Class '"PointProcessSmooth"'
ppKernel Generalized linear point process modeling using reproducing kernels.
ppLasso Generalized linear point process modeling using lasso penalization.
ppmFit Construction and estimation of a generalized linear point process model.
ppmFit-method Construction and estimation of a generalized linear point process model.
ppSmooth Generalized linear point process modeling using smoothing splines.
ppstat Point Process Statistics
predict-method Class "PointProcessModel"
print.summary.glppm summary
process Class "ProcessData"
process-method Class "ProcessData"
processData Class "PointProcess"
processdata Process Data
ProcessData-class Class "ProcessData"
processData-method Class "PointProcess"
processData<- Class "PointProcess"
processData<--method Class "PointProcess"
ProcessPlotData-class Class "ProcessPlotData"

-- R --

registerParBackend Parallel backend for the 'ppstat' package.
response Class "PointProcess"
response-method Class "PointProcess"

-- S --

setModelMatrix<- Class "PointProcessModel"
setModelMatrix<--method Class "PointProcessModel"
setUnitData Class "ProcessData"
setUnitData-method Class "ProcessData"
show-method Class "ContinuousProcess"
show-method Class "PointProcessModel"
simulate-method Class '"MultivariatePointProcess"'
sobolevKernel Reproducing kernels
stepInformation Stepwise point process model selection
stepInformation-method Stepwise point process model selection
str-method Compact display of the structure of a process data object.
subset-method Class "PointProcessModel"
subset-method Subsetting
summary-method Class "ContinuousProcess"
summary-method Class '"MultivariatePointProcess"'
summary-method summary

-- T --

termPlot termPlot
termPlot-method Class '"MultivariatePointProcess"'
termPlot-method termPlot
tExp Truncated Exponential
toyData A small toy data set.

-- U --

unitData Two small example data sets.
unsubset Subsetting
unsubset-method Subsetting
update-method Class '"PointProcessKernel"'
update-method Class '"PointProcessSmooth"'
update-method update
update-methods update
updateProcessObject Functions to update old objects with new slots.
updateProcessObject-method Functions to update old objects with new slots.

-- V --

vcov-method Class "PointProcessModel"

-- misc --

$-method Extraction of column(s) from a process data object.
[-method Subsetting