A pedagogical tool to teach the basics of inference in population genetics

Documentation for package ‘infeR’ version 0.7

expected.fst	Compute the Expected F_{ST}
fst	Compute the F_{ST} for a Sample of Genes
generate.prior	Generate Prior Values for the Parameters theta and M
infeR	A Pedagogical Tool to Teach the Basics of Inference in Population Genetics
log.beta.binomial	Internal infeR Function
maximum.likelihood	Perform a Maximum-Likelihood Analysis of a Sample of Genes in a Subdivided Population
migraine.colors	Internal infeR Function
prcp.ca	Perform a Principal Component Analysis
run.mcmc	Perform a Bayesian Analysis of a Sample of Genes in a Subdivided Population
sim.coalescent	Simulate a Sample of Genes Using the Coalescent
sim.inference.model	Simulate a Sample of Genes
sim.island.model	Simulate Artificial Data from an Island Model
SimulateCoalescentTree	Internal infeR Function