addDerivedCategorical | Add binned variable to NONMEM object |
addDerivedCategorical-method | Standard/"basic" NONMEM individual problem |
addDerivedCategorical-method | Standard/"basic" NONMEM 7 individual problem |
addDerivedCategorical-method | NONMEM run container class |
addDerivedCategorical-method | Class for holding simulation problems that don't fit models |
addDerivedCategorical-method | Class "NMSimModel" |
addDerivedCategorical-method | Class "NMSimModelNM7" |
addedData | Get added data |
addedData-method | Class "NMProblem" |
addedData-method | NONMEM run container class |
addVarDescription | Adds a variable description |
applyDataSubset | Modify and apply data subsets |
augmentDataSubset<- | Modify and apply data subsets |
augmentDefaultDataSubset | Configure the global data subset attached to NONMEM problems on loading |
availableLogs | Logging utilities |
closeLogConnection | Logging utilities |
dataSubset | Modify and apply data subsets |
dataSubset<- | Modify and apply data subsets |
defaultDataSubset | Configure the global data subset attached to NONMEM problems on loading |
getControlStatements | Various miscellaneous "getter"/extractor functions |
getControlStatements-method | Class "NMProblem" |
getControlStatements-method | NONMEM run container class |
getControltext | Various miscellaneous "getter"/extractor functions |
getEstimateCov | Returns variance-covariance matrix, if available, from a NONMEM object |
getEstimateCov-method | Standard/"basic" NONMEM individual problem |
getEstimateCov-method | Standard/"basic" NONMEM 7 individual problem |
getEstimateCov-method | NONMEM run container class |
getFileinfo | Various miscellaneous "getter"/extractor functions |
getIterations | Extract parameter estimate iteration information from a given NONMEM problem |
getIterations-method | Extract parameter estimate iteration information from a given NONMEM problem |
getMethodNames | Get method names |
getMethodNames-method | Standard/"basic" NONMEM 7 individual problem |
getMethodNames-method | NONMEM run container class |
getMethodNames-method | Class "NMSimModelNM7" |
getNmFileExtensions | Gets allowed NONMEM file extensions |
getNmPath | Gets a user defined path |
getNmVersion | Various miscellaneous "getter"/extractor functions |
getNmVersion-method | Class "NMProblem" |
getNmVersion-method | NONMEM run container class |
getObjective | Retrieve objective function value |
getObjective-method | Standard/"basic" NONMEM individual problem |
getObjective-method | Standard/"basic" NONMEM 7 individual problem |
getObjective-method | NONMEM run container class |
getObjective-method | Class "NMSimModel" |
getObjective-method | Class "NMSimModelNM7" |
getOmegas | Retrieve OMEGA estimates, initial values of |
getOmegas-method | Standard/"basic" NONMEM individual problem |
getOmegas-method | Standard/"basic" NONMEM 7 individual problem |
getOmegas-method | NONMEM run container class |
getOmegas-method | Class for holding simulation problems that don't fit models |
getOmegas-method | Class "NMSimModel" |
getOmegas-method | Class "NMSimModelNM7" |
getOmegas-method | Auxilliary class for representing control file statements |
getProblem | Extract an individual NONMEM problem |
getReporttext | Various miscellaneous "getter"/extractor functions |
getSigmas | A generic function that extracts sigma estimates (and initial estimates and standard errors if specified) from a NONMEM object. |
getSigmas-method | Standard/"basic" NONMEM individual problem |
getSigmas-method | Standard/"basic" NONMEM 7 individual problem |
getSigmas-method | NONMEM run container class |
getSigmas-method | Class for holding simulation problems that don't fit models |
getSigmas-method | Class "NMSimModel" |
getSigmas-method | Class "NMSimModelNM7" |
getSigmas-method | Auxilliary class for representing control file statements |
getSimInfo | Various miscellaneous "getter"/extractor functions |
getSimInfo | Get Simulation Information. |
getSimInfo-method | NONMEM run container class |
getSimInfo-method | Class for holding simulation problems that don't fit models |
getSimInfo-method | Class "NMSimModel" |
getSimInfo-method | Class "NMSimModelNM7" |
getThetas | A generic function that extracts theta estimates (and initial estimates and standard errors if specified) from a NONMEM object. |
getThetas-method | Standard/"basic" NONMEM individual problem |
getThetas-method | Standard/"basic" NONMEM 7 individual problem |
getThetas-method | NONMEM run container class |
getThetas-method | Class for holding simulation problems that don't fit models |
getThetas-method | Class "NMSimModel" |
getThetas-method | Class "NMSimModelNM7" |
getThetas-method | Auxilliary class for representing control file statements |
getVarDescription | Gets a variable description |
importNm | Import a NONMEM run |
importNm7Tables | Import new NONMEM 7 table files |
importNmInter | Import NONMEM "inter" file |
importNmMod | Parse a NONMEM control file |
importNmReport | Import the information in an output report file |
imposeCategoryFormat | Forces the data in a NONMEM object to conform to the variable formats specified in the metadata. |
imposeCategoryFormat-method | Standard/"basic" NONMEM individual problem |
imposeCategoryFormat-method | Standard/"basic" NONMEM 7 individual problem |
imposeCategoryFormat-method | NONMEM run container class |
imposeCategoryFormat-method | Class for holding simulation problems that don't fit models |
imposeCategoryFormat-method | Class "NMSimModel" |
imposeCategoryFormat-method | Class "NMSimModelNM7" |
logConnection | Logging utilities |
logMessage | Logging utilities |
NMBasicModel-class | Standard/"basic" NONMEM individual problem |
NMBasicModelNM7-class | Standard/"basic" NONMEM 7 individual problem |
nmData | Extract input and / or output data tables from a NONMEM object |
nmData-method | Standard/"basic" NONMEM individual problem |
nmData-method | Standard/"basic" NONMEM 7 individual problem |
nmData-method | NONMEM run container class |
nmData-method | Class for holding simulation problems that don't fit models |
nmData-method | Class "NMSimModel" |
nmData-method | Class "NMSimModelNM7" |
nmDatabyVarType | Get NONMEM data by variable type |
nmDatabyVarType-method | Class "NMProblem" |
nmDatabyVarType-method | NONMEM run container class |
nmModel-class | Auxilliary class for representing control file statements |
NMProblem-class | Class "NMProblem" |
NMRun-class | NONMEM run container class |
nmRunReport-class | Auxilliary classes for representing report file statements |
NMSimDataGen-class | Class for holding simulation problems that don't fit models |
NMSimModel-class | Class "NMSimModel" |
NMSimModelNM7-class | Class "NMSimModelNM7" |
readNmData | Read NONMEM dataset removing any "IGNORE" rows and dealing with (possibly repeated) headers... |
removeNmPath | Removes a user specified path |
runRNMImportTests | run package regression tests |
setDefaultDataSubset | Configure the global data subset attached to NONMEM problems on loading |
setLogConnection | Logging utilities |
setLogFile | Logging utilities |
setNmFileExtensions | file allowed file extensions |
setNmPath | Stores a user specified path |
setVarDescription | Sets new variable characteristics |
show-method | Standard/"basic" NONMEM individual problem |
show-method | Standard/"basic" NONMEM 7 individual problem |
show-method | NONMEM run container class |
show-method | Class for holding simulation problems that don't fit models |
show-method | Class "NMSimModel" |
show-method | Class "NMSimModelNM7" |