Differential Analysis of RNA-Seq Data with Poisson Mixture Models


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Documentation for package ‘HTSDiff’ version 1.0.6

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HTSDiff-package Differential Analysis of RNA-Seq Data with Poisson Mixture Models
HTSDiff Differential analysis of RNA-seq data using a Poisson mixture model
initialDataset RNA-seq data from Arabidopsis thaliana to be used to generate synthetic simulations
nullModelLogLike Calculation of loglikelihood for null model in differential analysis.
syntheticData Generate synthetic data with a pre-specified number or proportion of genes under the null hypothesis (non-differential expression)