Recovering Structure of Long Molecules from Structural Variation Data


[Up] [Top]

Documentation for package ‘SVAlignR’ version 0.2.3

Help Pages

alignAllClusters Class '"AlignedCluster"'
alignCluster Class '"AlignedCluster"'
AlignedCluster-class Class '"AlignedCluster"'
breakpoints SVAlignR Sample Data
Cipher Class '"Cipher"'
Cipher-class Class '"Cipher"'
decode Class '"Cipher"'
DecompositionGraph Class '"StringGraph"'
encode Class '"Cipher"'
exportSG Class '"StringGraph"'
heat Class '"SequenceCluster"'
image-method Class '"AlignedCluster"'
longreads SVAlignR Sample Data
makeSubsMatrix Class '"AlignedCluster"'
MotifGraph Class '"StringGraph"'
plot-method Class '"SequenceCluster"'
plot-method Class '"StringGraph"'
SequenceCluster Class '"SequenceCluster"'
SequenceCluster-class Class '"SequenceCluster"'
StringGraph Class '"StringGraph"'
StringGraph-class Class '"StringGraph"'
SVAlignR-data SVAlignR Sample Data
updateClusters Class '"SequenceCluster"'