mdr {qfa} | R Documentation |
Calculates the Generalised Logistic Model (http://en.wikipedia.org/wiki/Generalised_logistic_function) version of the Maximum Doubling Rate as presented in Addinall et al. 2011 (http://www.plosgenetics.org/doi/pgen.1001362). MDR is the inverse of the doubling time at the beginning of the experiment, where competition between cultures is at its lowest level.
mdr(K,r,g,v)
K |
Culture carrying capacity (AU). Same units as (normalised) cell density observed in growth curve. |
r |
Culture growth rate parameter (per day). |
g |
Inoculum denisty (AU). Same units as (normalised) cell density observed in growth curve. |
v |
Shape parameter. Recover logistic model with v = 0. |