segmentationObject {MPAgenomics}R Documentation

Create the list of parameters for segmentation function

Description

create the list of parameters for segmentation function

Usage

segmentationObject(copynumber, chromosome, position, featureNames, sampleNames)

Arguments

copynumber

A vector containing the copy-number signal for one patient and one chromosome.

chromosome

Chromosome associated with the copy-number signal.

position

Position of the signal.

featureNames

Names of the probes (not necessary).

sampleNames

Name of the sample (not necessary).

Value

a list in the right format for segmentation function

Author(s)

Quentin Grimonprez


[Package MPAgenomics version 1.1.8 Index]