summaryGenMap {synbreed} | R Documentation |
This function can be used to summarize information from a marker map in an object of class gpData
. Return value is a data.frame
with one row for each chromosome and one row summarizing all chromosomes.
summaryGenMap(map, cores=1)
map |
|
cores |
|
Summary statistics of differences are based on euclidian distances between markers with non-missing position in map
, i.e. pos!=NA
.
A data.frame
with one row for each chromosome and the intersection of all chromosomes and columns
noM |
number of markers |
range |
range of positions, i.e. difference between first and last marker |
avDist |
avarage distance of markers |
maxDist |
maximum distance of markers |
minDist |
minimum distance of markers |
Valentin Wimmer
## Not run: library(synbreedData) data(maize) summaryGenMap(maize) ## End(Not run)