cmf_krr_ecvr {conmolfields} | R Documentation |
External n-fold cross-validation with reshuffings
Description
External n-fold cross-validation with reshuffings
Usage
cmf_krr_ecvr(act_all_fname = "activity-all.txt", act_colnum = 2, sep = ",", kernels_all_fname = "ligands-kernels-all.RData", ecvr_fname = "ligands-ecvr.RData", ...)
Arguments
act_all_fname |
|
act_colnum |
|
sep |
|
kernels_all_fname |
|
ecvr_fname |
|
... |
|
Examples
##---- Should be DIRECTLY executable !! ----
##-- ==> Define data, use random,
##-- or do help(data=index) for the standard data sets.
## The function is currently defined as
function (act_all_fname = "activity-all.txt", act_colnum = 2,
sep = ",", kernels_all_fname = "ligands-kernels-all.RData",
ecvr_fname = "ligands-ecvr.RData", ...)
{
act <- read.table(act_all_fname, header = TRUE, sep = sep)
y <- act[, act_colnum]
load(kernels_all_fname)
ecvr <- cmf_krr_ecvr_mem(y = y, kernels = kernels, ...)
save(ecvr, file = ecvr_fname)
ecvr
}
[Package
conmolfields version 0.0-19
Index]