cmf_krr_train {conmolfields} | R Documentation |
To build model
cmf_krr_train(act_train_fname = "activity-train.txt", act_colnum = 2, sep = ",", kernels_train_fname = "ligands-kernels-train.RData", model_fname = "ligands-model.RData", ...)
act_train_fname |
"activity-train.txt" |
act_colnum |
2 |
sep |
"," |
kernels_train_fname |
"ligands-kernels-train.RData" |
model_fname |
"ligands-model.RData" |
... |
##---- Should be DIRECTLY executable !! ---- ##-- ==> Define data, use random, ##-- or do help(data=index) for the standard data sets. ## The function is currently defined as function (act_train_fname = "activity-train.txt", act_colnum = 2, sep = ",", kernels_train_fname = "ligands-kernels-train.RData", model_fname = "ligands-model.RData", ...) { act <- read.table(act_train_fname, header = TRUE, sep = sep) y <- act[, act_colnum] load(kernels_train_fname) model <- cmf_krr_train_mem(y = y, kernels = kernels, ...) save(model, file = model_fname) }