annotation_label {herblabel} | R Documentation |
Making RTF Annotation labels based on annotation template
annotation_label(dat = NULL, spellcheck = TRUE, outfile = "Annotation_Labels.rtf")
dat |
data frame of Annotation Template. |
spellcheck |
Logical, whether the spell checking for species should be porformed. |
outfile |
the names of the output rtf file. |
This function reads csv or data frame "annoation template", and generates RTF file containing annotation labels.
PROJECT
: project related with this annotation. eg. Examined for the Revision for the Fern Flora of Hong Kong
TYPE_STATUS
: which kind of type specimen: eg. ISOTYPE
TYPE_REF
: what reference the identification was based upon. DC. Monogr. Phanerog. 6: 409. 1889.
FAMILY
: Family, eg. Magnoliaceae
GENUS
:Genus, eg. Ophioglossum
SPECIES
:Species, eg. petiolatum
AUTHOR_OF_SPECIES
: Author, eg. Hook.
INFRASPECIFIC_RANK
: Infra-specific Rank, eg. var., f. or subsp.
INFRASPECIFIC_EPITHET
: Epithet for the infra specific rank.
AUTHOR_OF_INFRASPECIFIC_RANK
: Author for the infra specific rank.
ABBREVIATION
: Role of the person annotating this herbarium specimen, eg. "Det.", "Verified by".
IDENTIFIED_BY
:Who identified the species, eg. Jin-Long Zhang
INSTITUTION
:The institution where the identification was made, eg. KFBG
DATE_IDENTIFIED
: should follow the format: 2014-12-19 for "19 December 2014".
DET_NOTE
:The specimen is extremely close to Ranunculus japonicus
SPECIMEN_NUMBER
: Global Unique Identifier, see the help file for herbarium_label
for more information.
COLLECTOR
: Collector of this specimen
COLLECTOR_NUMBER
: collector's number of this specimen.
Jinlong Zhang jinlongzhang01@gmail.com
path <- system.file("extdata", "ANNOTATION_TEMPLATE.xlsx", package = "herblabel") library(openxlsx) dat <- read.xlsx(path) annotation_label(dat)