org.Hs.egHPPA {dnet}R Documentation

Annotations of Human Entrez Genes (EG) by Human Phenotype Phenotypic Abnormality (HPPA).

Description

An R object that contains associations between HPPA terms and Human Entrez Genes. This data is first prepared based on http://purl.obolibrary.org/obo/hp.obo and http://compbio.charite.de/hudson/job/hpo.annotations.monthly/lastStableBuild/artifact/annotation/ALL_SOURCES_ALL_FREQUENCIES_genes_to_phenotype.txt.

Usage

data(org.Hs.egHPPA)

Value

an object of class "GS", a list with following components:

References

Robinson et al. (2012) The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease. Am J Hum Genet, 83:610-615.

Examples

org.Hs.egHPPA <- dRDataLoader(RData='org.Hs.egHPPA')
names(org.Hs.egHPPA)

[Package dnet version 1.1.3 Index]