KernSeg_CNBAF {KernSeg}R Documentation

KernSeg CNBAF

Description

kernel segmentation for CN and BAF signal

Usage

KernSeg_CNBAF(geno, Kmax, delta, min.size = 1)

Arguments

geno

a n x 2 matrix where the first column is cn and the second is baf

Kmax

maximum number of changes

delta

parameter of the kernel (delta.cn, delta.baf)

min.size

minimum size of a segment -1 (1 = no constraint 2 = at least 2)

Author(s)

Guillem Rigaill


[Package KernSeg version 0.0.2 Index]