KernSeg_MultiD_ {KernSeg} | R Documentation |
Core function to call C code for the mD case
KernSeg_MultiD_(geno, Kmax, delta, min.size = 1, alpha = NULL, kernel = "Gaussian", option = 0)
geno |
a matrix n x m |
Kmax |
maximum number of changes |
delta |
parameter of the kernel (delta.cn, delta.baf) |
min.size |
minimum size of a segment -1 (1 = no constraint 2 = at least 2) |
alpha |
some other parameter |
kernel |
kernel ("L2", "Gaussian") |
option |
for Mattesson divergence 0 or 1 (as Kernseg or as Ecp divide by n or n-1 per segment) |
Guillem Rigaill