aniso |
A simulated haploid genotypic data set exhibiting zonal anistropy |
crypho |
A haploid microsatellite dataset for the chestnut blight fungus _Cryphonectria parasitica_ |
distlag |
Compute custom distance lags |
fitsvariog |
Fit an exponential model to empirical variogram |
gene2geo |
Creates a 'ggene' object from a 'genind' object and a coordinates data frame |
genocount |
Identifies the different genotypes in a data set |
genoweight |
Compute a matrix of weights accounting for recurrent genotypes |
ggene |
Semivariogram and exploratory spatial analysis of genetic data |
larix1350 |
A dataset corresponding to the microsatellite data for a set of 189 European larch trees _Larix decidua_ sampled in the French Alps at the altitude 1350 m asl |
larix2300 |
A dataset corresponding to the microsatellite data for a set of 175 European larch trees _Larix decidua_ sampled in the French Alps at the altitude of 2300 m asl |
randsvariog |
Performs permutations and computes the variogram statistical envelope |
sim01 |
A haploid genotypic data set simulated with the software IBDsim (Leblois et al 2009) |
sim02 |
A haploid genotypic dataset simulated with the software IBDsim (Leblois et al 2009). |
sim03 |
A haploid genotypic data set simulated with the software IBDsim (Leblois et al 2009) |
subsetdata |
Extracts data subsets |
svariog |
Semivariogram computation |
svarmap |
Compute the variogram map for a genetic dataset |
tab2geo |
Create a 'ggene' object from data frames |
varioWeight |
Variogram computation with weighting for recurrent genotypes |
Wagner |
The example data set used in Wagner et al (2005) |