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A C D E F G H I K L M N O P Q S T U V W
| varComp-package | Variance Component Models |
| AEI | Internal functions not supposed to be called directly |
| AM | Kernel functions useful for genetic associations |
| am | Kernel functions useful for genetic associations |
| anova.varComp | ANOVA-type analysis of fixed effect parameters |
| AOI | Internal functions not supposed to be called directly |
| callList2terms | Internal formula term manipulation functions |
| char2list | Create a list with components given by their names |
| cholRoot | Lower Cholesky Root |
| coef.varComp | Obtaining parameter estimates from a varComp object |
| colon | Some symbols that might be used in formulas |
| doFit.varComp | Fitting variance component models |
| EI | Internal functions not supposed to be called directly |
| fixed.effects | ANOVA-type analysis of fixed effect parameters |
| fixef | ANOVA-type analysis of fixed effect parameters |
| fixef.varComp | ANOVA-type analysis of fixed effect parameters |
| get.seed | Recording pseudo-random number seeds |
| gradFunc | Internal functions not supposed to be called directly |
| hess | Internal functions not supposed to be called directly |
| IBS | Kernel functions useful for genetic associations |
| ibs | Kernel functions useful for genetic associations |
| informationTypes | Functions controlling the model fitting of varComp |
| is.formula | Check if an object is a formula |
| KR.varComp | Wald-type tests for fixed effect parameters |
| Lin0 | Kernel functions useful for genetic associations |
| lin0 | Kernel functions useful for genetic associations |
| LinScoreWeightingMethods | Control of variance component testing |
| logLik.varComp | Extracting Profiled Restricted Log Likelihood |
| mchibarsq | Chi-bar-square distribution with nonnegativity cone constraints |
| Minkowski | Kernel functions useful for genetic associations |
| minkowski | Kernel functions useful for genetic associations |
| minque | Minimum norm quadratic unbiased estimation |
| model.matrix.varComp | Extracting model matrices |
| nlminb.control | Functions controlling the model fitting of varComp |
| normalizeTrace | Rescales a square matrix such that the trace is the same as the dimension |
| obj | Internal functions not supposed to be called directly |
| obj2 | Internal functions not supposed to be called directly |
| OI | Internal functions not supposed to be called directly |
| p.value | Extracting p-values |
| p.value.default | Extracting p-values |
| p.value.htest | Extracting p-values |
| p.value.varComp.test | Extracting p-values |
| p.value.varCompFixEf | Extracting p-values |
| pchibarsq | Chi-bar-square distribution with nonnegativity cone constraints |
| plus | Some symbols that might be used in formulas |
| Polyk | Kernel functions useful for genetic associations |
| polyk | Kernel functions useful for genetic associations |
| PREML | Internal functions not supposed to be called directly |
| preprocPREML | Internal functions not supposed to be called directly |
| print.varComp | Summary and printing of varComp objects |
| print.varComp.test | Print variance component test results |
| print.varCompFixEf | ANOVA-type analysis of fixed effect parameters |
| Quad1 | Kernel functions useful for genetic associations |
| quad1 | Kernel functions useful for genetic associations |
| safeseq | A "safer" seq |
| satterth.varComp | Wald-type tests for fixed effect parameters |
| score | Internal functions not supposed to be called directly |
| sortTerm | Internal formula term manipulation functions |
| splitTerm | Internal formula term manipulation functions |
| star | Some symbols that might be used in formulas |
| summary.varComp | Summary and printing of varComp objects |
| tilde | Some symbols that might be used in formulas |
| updateDenom | Internal functions not supposed to be called directly |
| updateLI | Internal functions not supposed to be called directly |
| updateLIkLI | Internal functions not supposed to be called directly |
| updateLIy | Internal functions not supposed to be called directly |
| updateNegGrad | Internal functions not supposed to be called directly |
| updateNegHess | Internal functions not supposed to be called directly |
| updateNums | Internal functions not supposed to be called directly |
| updateNums2 | Internal functions not supposed to be called directly |
| updateNumsPart | Internal functions not supposed to be called directly |
| updateTr1 | Internal functions not supposed to be called directly |
| updateTr2 | Internal functions not supposed to be called directly |
| V | Internal functions not supposed to be called directly |
| varComp | Fitting variance component models |
| varComp.control | Functions controlling the model fitting of varComp |
| varComp.fit | Fitting variance component models |
| varComp.LinScore.approximation | Defunct functions |
| varComp.LinScore.beta | Not-yet-implemented functions |
| varComp.LinScore.cumulant3 | Not-yet-implemented functions |
| varComp.LinScore.LC12 | Defunct functions |
| varComp.LinScore.LC12Boundary | Defunct functions |
| varComp.LinScore.Normal | Internal functions not supposed to be called directly |
| varComp.LinScore.pboot | Not-yet-implemented functions |
| varComp.LinScore.saddlepoint | Not-yet-implemented functions |
| varComp.LinScore.Satterthwaite | Internal functions not supposed to be called directly |
| varComp.LinScore.SSAS155 | Internal functions not supposed to be called directly |
| varComp.LinScore.test | Internal functions not supposed to be called directly |
| varComp.RLRT.test | Internal functions not supposed to be called directly |
| varComp.RWD88.test | Not-yet-implemented functions |
| varComp.SS95.test | Internal functions not supposed to be called directly |
| varComp.test | Tests for Nullity of Variance Components |
| varComp.test.2modelDoTest | Internal functions not supposed to be called directly |
| varComp.test.altDoTest | Internal functions not supposed to be called directly |
| varComp.test.Common | Internal functions not supposed to be called directly |
| varComp.test.formula | Tests for Nullity of Variance Components |
| varComp.test.nulDoTest | Internal functions not supposed to be called directly |
| varComp.test.varComp | Tests for Nullity of Variance Components |
| varComp.VM03.test | Internal functions not supposed to be called directly |
| varComp.Wald.test | Not-yet-implemented functions |
| varCompScoreTests | Control of variance component testing |
| varCompTest.control | Control of variance component testing |
| varCompTests | Control of variance component testing |
| vcov.varComp | Extracting Variance-Covariance Matrices |
| WAI | Internal functions not supposed to be called directly |
| wchibarsq | Chi-bar-square distribution with nonnegativity cone constraints |