rbrothers: multiple change-point recombination detection


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Documentation for package ‘rbrothers’ version 0.0-1

Help Pages

breakpointCI 95% breakpoint credible interval
db db
db.default db.default
dualbrothers Recombination Analysis via DualBrothers
epprofile EPProfile
extractbasename extract the basename from an rbrothers object
findbreakpoints FindBreakPoints
plot.db Plot a dualbrothers object
plotkappa Plot Posterior values of Kappa for a DualBrothers object
plotmcmc MCMC trace plot of log likelihoods
plotmu Plot Posterior values of Mu for a DualBrothers object
plottree.db Plots the most likely phylogenetic trees
readdb import a dualbrothers object
summary.db Summary of a dualbrothers object
topologyprofile TopologyProfile