| qtl.outbred-package | Interface for Genotype Probabilities of Outbred Intercross |
| calc.prob | Calculate genotype probabilities for outbred intercrosses using cnF2freq |
| impo.prob | Import genotype probabilities into an existing cross object |
| outbred | Plot LOD curves for outbred data |
| plot.outbred | Plot LOD curves for outbred data |
| plot_outbred | Plot LOD curves for outbred data |
| qtl.outbred | Interface for Genotype Probabilities of Outbred Intercross |
| Scanone | Genome scan with a single QTL model |