Algorithms for lasso and fused-lasso problems.

Documentation for package ‘HDPenReg’ version 0.89

HDPenReg-package	Algorithms for lasso and fused-lasso problems.
coeff	get coefficients at a given step.
computeCoefficients	Compute coefficients
EMcvfusedlasso	cross validation for EM fused-lasso
EMcvlasso	cross validation for EM lasso
EMfusedlasso	EM algorithm for fused lasso penalty
EMlasso	EM algorithm for lasso penalty
HDcvlars	cross validation
HDfusion	Fusion algorithm
HDlars	Lars algorithm
HDPenReg	Algorithms for lasso and fused-lasso problems.
HDpredict	Prediction of response
LarsPath-class	Constructor of LarsPath class
plot-method	plot methods for LarsPath object
plot-methods	plot methods for LarsPath object
plotCoefficient	Plot of coefficients
plotCv	plot cross validation mean square error
simul	Simulate copy number data for a case-control study.